The latest state-of-the-art Computer Aided Production Engineering (CAPE) simulation technology offers OPC integration for PLC verification. A critical drawback with this technology has been identified and described within this paper. A new time synchronisation method and a simulation architecture are therefore presented and proposed. The time synchronisation method together with the architecture can be used when verifying and developing real-time dependent control logic for industrial control system, e.g. PLC with CAPE tools. The method described in this paper is general and should work on any PLCs that are compatible with the IEC 61131-3 standard. A test case was also carried out, showing that by disregarding time synchronisation it is impossible to verify real-time dependent PLC functions together with CAPE tools in a reliable way. However, the test case also shows that by applying the proposed time synchronisation method together with the described simulation architecture a successful industrial verification method is achieved